Biomedical Models

In this section, we cover the biomedical and clinical syntactic analysis and named entity recognition models offered in Stanza. We also report their performance, comparisons to other tools, and how to download and use these packages.

For more detailed information on how we created these models and our analysis of them, please check out our biomedical models system description paper presented in JAMIA:

 Biomedical Models Description Paper

You can also find an earlier arxiv version of this paper.

An online demo of our biomedical and clinical models is available at:

 Online Demo

Bibtex for citing our paper is:

    author = {Zhang, Yuhao and Zhang, Yuhui and Qi, Peng and Manning, Christopher D and Langlotz, Curtis P},
    title = {Biomedical and clinical {E}nglish model packages for the {S}tanza {P}ython {NLP} library},
    journal = {Journal of the American Medical Informatics Association},
    year = {2021},
    month = {06},
    issn = {1527-974X}

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